PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009777955.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 205aa    MW: 22982.1 Da    PI: 8.2263
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009777955.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.5e-20554154
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                    ++++GVr+++ +g+Wv+eIr+p        +r++lg+f+taeeAa+a+++a+  + 
  XP_009777955.1  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFDTAEEAARAYDQAAILMS 54
                    59*******9.**********8.....334*********************98776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.02E-36565No hitNo description
SuperFamilySSF541717.85E-21664IPR016177DNA-binding domain
PfamPF008479.5E-13653IPR001471AP2/ERF domain
PROSITE profilePS5103222.01663IPR001471AP2/ERF domain
SMARTSM003803.6E-40669IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.3E-33663IPR001471AP2/ERF domain
PRINTSPR003679.1E-11718IPR001471AP2/ERF domain
PRINTSPR003679.1E-112945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MVHSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFDTAE EAARAYDQAA ILMSGRNAKT  60
NFPITDDSDN KELKAKDQEF SSIPSPKALS EILHAKLRKC SKAPSPSLTC LRLDIESSHI  120
GVWQKRAGPS SDSKCVMTVE LQKKNNVKNA IEGELNSSST SSSKNCGEIV EGINIRSEMD  180
EEERVALQMI EELLNINSPC PTFDI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-17564161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754511e-32HG975451.1 Solanum pennellii chromosome ch12, complete genome.
GenBankHG9755241e-32HG975524.1 Solanum lycopersicum chromosome ch12, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009777955.11e-151PREDICTED: ethylene-responsive transcription factor WIN1-like isoform X1
RefseqXP_016465391.11e-151PREDICTED: ethylene-responsive transcription factor WIN1-like isoform X1
SwissprotQ9XI333e-73WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBLM0ZT301e-111M0ZT30_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000074941e-110(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13522476
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.13e-63ERF family protein